NAR database issue

http://m.nar.oxfordjournals.org/content/42/D1?etoc&utm_source=buffer&utm_campaign=Buffer&utm_content=buffer9beee&utm_medium=twitter

Reproducible copy number variation - CTC

http://www.ncbi.nlm.nih.gov/m/pubmed/24324171/?i=59&from=whole%20genome%20sequencing

Data analysis with Python — Practical Computing for Biologists

http://people.duke.edu/~ccc14/pcfb/analysis.html

Mining cancer methylomes: prospects and challenges

http://www.sciencedirect.com/science/article/pii/S0168952513001959

Wiggletool

http://m.bioinformatics.oxfordjournals.org/content/early/2013/12/18/bioinformatics.btt737.short?rss=1&utm_content=buffer21378&utm_source=buffer&utm_medium=twitter&utm_campaign=Buffer

PLOS ONE: DistMap: A Toolkit for Distributed Short Read Mapping on a Hadoop Cluster

http://www.plosone.org/article/info:doi/10.1371/journal.pone.0072614

Instant notes on Bioinformatics

http://davetang.org/wiki/tiki-index.php?page=Bioinformatics

GONOME: measuring correlations between GO terms and genomic positions

http://www.biomedcentral.com/1471-2105/7/94

Listening to silence and understanding - PubMed Mobile

http://www.ncbi.nlm.nih.gov/m/pubmed/11967553/

450k Chip Analysis Methylation Pipeline (ChAMP)

http://www.citeulike.org/user/neils/article/12832448?utm_source=twitterfeed&utm_medium=twitter

DGIdb - Mining the Druggable Genome

http://dgidb.genome.wustl.edu/

Platinum Genomes illumina whole genome sequence

http://www.illumina.com/platinumgenomes/

Genome Biology | Full text | Patchwork: allele-specific copy number analysis of whole genome sequenced tumor tissue

http://genomebiology.com/2013/14/3/R24

Genome Biology | Full text | THetA: Inferring intra-tumor heterogeneity from high-throughput DNA sequencing data

http://genomebiology.com/2013/14/7/R80

Genome Biology | Abstract | EXCAVATOR: detecting copy number variants from whole-exome sequencing data

http://genomebiology.com/2013/14/10/R120/abstract

Gene inactivation and its implications for annotation in the era of personal genomics

http://m.genesdev.cshlp.org/content/25/1/1.short

Network analysis of GWAS data

http://www.sciencedirect.com/science/article/pii/S0959437X13001354

Variant annotation AVIA - ABCC :: Upload Parameters for AVIA Analysis

http://avia.abcc.ncifcrf.gov/apps/site/sub_analysis/?id=3

GEMINI tutorial

http://quinlanlab.org/tutorials/cshl2013/gemini.html

Studies Reveal Extreme Diversity of Cancer Cells | Simons Foundation

https://www.simonsfoundation.org/quanta/20131113-tracking-the-evolution-of-cancer-cell-by-cell/

Human Somatic Variation: It’s Not Just for Cancer Anymore - Springer

http://link.springer.com/article/10.1007/s40142-013-0029-z