Platinum Genomes illumina whole genome sequence

http://www.illumina.com/platinumgenomes/

Genome Biology | Full text | Patchwork: allele-specific copy number analysis of whole genome sequenced tumor tissue

http://genomebiology.com/2013/14/3/R24

Genome Biology | Full text | THetA: Inferring intra-tumor heterogeneity from high-throughput DNA sequencing data

http://genomebiology.com/2013/14/7/R80

Genome Biology | Abstract | EXCAVATOR: detecting copy number variants from whole-exome sequencing data

http://genomebiology.com/2013/14/10/R120/abstract

Gene inactivation and its implications for annotation in the era of personal genomics

http://m.genesdev.cshlp.org/content/25/1/1.short

Network analysis of GWAS data

http://www.sciencedirect.com/science/article/pii/S0959437X13001354

Variant annotation AVIA - ABCC :: Upload Parameters for AVIA Analysis

http://avia.abcc.ncifcrf.gov/apps/site/sub_analysis/?id=3

GEMINI tutorial

http://quinlanlab.org/tutorials/cshl2013/gemini.html

Studies Reveal Extreme Diversity of Cancer Cells | Simons Foundation

https://www.simonsfoundation.org/quanta/20131113-tracking-the-evolution-of-cancer-cell-by-cell/

Human Somatic Variation: It’s Not Just for Cancer Anymore - Springer

http://link.springer.com/article/10.1007/s40142-013-0029-z