Best SED tutorial for ever

http://www.grymoire.com/Unix/Sed.html

Ballgown bridges the gap between transcriptome assembly and expression analysis : Nature Biotechnology : Nature Publishing Group

http://www.nature.com/nbt/journal/v33/n3/full/nbt.3172.html

fastq-tools

I am browsing [fastq-tools]. Have a look at it! http://homes.cs.washington.edu/~dcjones/fastq-tools/?utm_content=buffer7e4f0&utm_medium=social&utm_source=twitter.com&utm_campaign=buffer

Hadoop 101 for bioinformaticians: 1 hour crash course, code and slides | Pimm - Partial immortalization

I am browsing [Hadoop 101 for bioinformaticians: 1 hour crash course, code and slides | Pimm - Partial immortalization]. Have a look at it! http://pimm.wordpress.com/2014/11/29/hadoop-101-for-bioinformaticians-1-hour-crash-course-code-and-slides/

PLOS Genetics: Transcriptome Sequencing from Diverse Human Populations Reveals Differentiated Regulatory Architecture

http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1004549

Genome Biology | Cancer genomics: one cell at a time

http://genomebiology.com/2014/15/8/452/abstract

Genome Biology | Abstract | Deep sequencing of the X chromosome reveals the proliferation history of colorectal adenomas

http://genomebiology.com/2014/15/8/437/abstract

Phen-Gen: combining phenotype and genotype to analyze rare disorders : Nature Methods : Nature Publishing Group

http://www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.3046.html

WEB TOOL Sequence Coverage

http://seqcoverage.com/

RNASEQ | MBASED: allele-specific expression detection in cancer tissues and cell lines

http://genomebiology.com/2014/15/8/405

NGS resource

http://training.bioinformatics.ucdavis.edu/docs/2013/09/short-course-2013/

Micro RNA and Cancer

http://www.cell.com/trends/molecular-medicine/abstract/S1471-4914(14)00101-4

Why do we have blood types? | Mosaic

Carl Zimmer

http://mosaicscience.com/story/why-do-we-have-blood-types

Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications : Nature Genetics : Nature Publishing Group

http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3036.html

TCPA: a resource for cancer functional proteomics data

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4076789/

Genome sequencing of normal cells reveals developmental lineages and mutational processes : Nature : Nature Publishing Group

http://www.nature.com/nature/journal/vaop/ncurrent/full/nature13448.html

Whole-genome sequence variation, population structure and demographic history of the Dutch population : Nature Genetics : Nature Publishing Group

http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.3021.html

Genome Biology | Abstract | LUMPY: A probabilistic framework for structural variant discovery

http://genomebiology.com/2014/15/6/R84/abstract

IMPC | International Mouse Phenotyping Consortium

http://www.mousephenotype.org/

BMC Bioinformatics | Abstract | An integrative method to normalize RNA-Seq data

http://www.biomedcentral.com/1471-2105/15/188/abstract