Genetics-Genomics-Knowledge

Wednesday, 31 July 2013

Computational approaches to identify functional genetic variants in cancer genomes : Nature Methods : Nature Publishing Group

http://www.nature.com/nmeth/journal/v10/n8/pdf/nmeth.2562.pdf

Posted by YourDigitalKnowledgeFinder at 09:26 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

Sunday, 28 July 2013

PLOT Gallery · mbostock/d3 Wiki · GitHub

https://github.com/mbostock/d3/wiki/Gallery

Posted by YourDigitalKnowledgeFinder at 21:27 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

Friday, 26 July 2013

Microbial Informatics and Experimentation | Full text | Beginner's guide to comparative bacterial genome analysis using next-generation sequence data

http://www.microbialinformaticsj.com/content/3/1/2

Posted by YourDigitalKnowledgeFinder at 23:17 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

Wednesday, 17 July 2013

Evaluating cell lines as tumour models by comparison of genomic profiles : Nature Communications : Nature Publishing Group

http://www.nature.com/ncomms/2013/130709/ncomms3126/full/ncomms3126.html

Posted by YourDigitalKnowledgeFinder at 21:39 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

The Exomes of the NCI-60 Panel: A Genomic Resource for Cancer Biology and Systems Pharmacology (EXOME DATA)

http://cancerres.aacrjournals.org/content/73/14/4372.abstract

Posted by YourDigitalKnowledgeFinder at 21:22 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

Tuesday, 16 July 2013

Estimating and interpreting Fst: the impact of rare variants

http://genome.cshlp.org/content/early/2013/07/16/gr.154831.113.abstract.html?papetoc

Posted by YourDigitalKnowledgeFinder at 20:57 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

Monday, 15 July 2013

A comparative analysis of algorithms for somatic SNV detection in cancer

http://bioinformatics.oxfordjournals.org/content/early/2013/07/13/bioinformatics.btt375.short?rss=1&utm_content=buffer2860e&utm_source=buffer&utm_medium=twitter&utm_campaign=Buffer

Posted by YourDigitalKnowledgeFinder at 22:04 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

Sunday, 14 July 2013

Polyadenylation site–induced decay of upstream transcripts enforces promoter directionality : Nature Structural & Molecular Biology : Nature Publishing Group

http://www.nature.com/nsmb/journal/vaop/ncurrent/abs/nsmb.2640.html

Posted by YourDigitalKnowledgeFinder at 20:41 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

Monday, 8 July 2013

Identifying driver mutations from sequencing data of heterogeneous tumors in the era of personalized genome sequencing

http://bib.oxfordjournals.org/content/early/2013/07/01/bib.bbt042.short?rss=1&utm_content=bufferd117e&utm_source=buffer&utm_medium=twitter&utm_campaign=Buffer

Posted by YourDigitalKnowledgeFinder at 22:00 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

BMC Genomics | Full text | Large-scale integrative network-based analysis identifies common pathways disrupted by copy number alterations across cancers

http://www.biomedcentral.com/1471-2164/14/440?utm_content=buffer6ad6c&utm_source=buffer&utm_medium=twitter&utm_campaign=Buffer

Posted by YourDigitalKnowledgeFinder at 21:58 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

Tuesday, 2 July 2013

Trends in Genetics - Human housekeeping genes, revisited

http://www.cell.com/trends/genetics//retrieve/pii/S0168952513000899?_returnURL=http://linkinghub.elsevier.com/retrieve/pii/S0168952513000899?showall=true

Posted by YourDigitalKnowledgeFinder at 09:13 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

Genome Biology | Abstract | Transcriptome analysis of human tissues and cell lines reveals one dominant transcript per gene

http://genomebiology.com/2013/14/7/R70/abstract

Posted by YourDigitalKnowledgeFinder at 09:13 No comments:
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest
Newer Posts Older Posts Home
Subscribe to: Posts (Atom)

Popular Posts

  • Cancer genome-sequencing study design
    http://www.nature.com/nrg/journal/v14/n5/full/nrg3445.html
  • RADIA: RNA and DNA Integrated Analysis for Somatic Mutation Detection
    http://arxiv.org/abs/1402.0850
  • FishingCNV: a graphical software package for detecting rare copy number variations in exome-sequencing data
    http://bioinformatics.oxfordjournals.org/content/early/2013/04/24/bioinformatics.btt151.short?rss=1&buffer_share=c5ca4&utm_source=bu...
  • From FastQ Data to High-Confidence Variant Calls: The Genome Analysis Toolkit Best Practices Pipeline - Current Protocols in Bioinformatics - Auwera - Wiley Online Library
    http://onlinelibrary.wiley.com/doi/10.1002/0471250953.bi1110s43/abstract;jsessionid=FF13D61431F1B7A0666A3D6C0B4173E1.f03t01
  • Whole-genome sequencing identifies genetic alterations in pediatric low-grade gliomas : Nature Genetics : Nature Publishing Group
    http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.2611.html
  • eXtasy: Variant Prioritization
    http://homes.esat.kuleuven.be/~bioiuser/eXtasy/?utm_source=twitterfeed&utm_medium=twitter
  • Genome Biology | Abstract | Transcriptome analysis of human tissues and cell lines reveals one dominant transcript per gene
    http://genomebiology.com/2013/14/7/R70/abstract
  • WEB TOOL Sequence Coverage
    http://seqcoverage.com/
  • Best SED tutorial for ever
    http://www.grymoire.com/Unix/Sed.html
  • fastq-tools
    I am browsing [fastq-tools]. Have a look at it! http://homes.cs.washington.edu/~dcjones/fastq-tools/?utm_content=buffer7e4f0&utm_medium=...

Blog Archive

  • ►  2015 (2)
    • ►  June (1)
    • ►  March (1)
  • ►  2014 (44)
    • ►  December (1)
    • ►  November (1)
    • ►  September (2)
    • ►  August (4)
    • ►  July (5)
    • ►  June (7)
    • ►  March (4)
    • ►  February (9)
    • ►  January (11)
  • ▼  2013 (146)
    • ►  December (21)
    • ►  November (12)
    • ►  October (10)
    • ►  September (16)
    • ►  August (11)
    • ▼  July (12)
      • Computational approaches to identify functional ge...
      • PLOT Gallery · mbostock/d3 Wiki · GitHub
      • Microbial Informatics and Experimentation | Full t...
      • Evaluating cell lines as tumour models by comparis...
      • The Exomes of the NCI-60 Panel: A Genomic Resource...
      • Estimating and interpreting Fst: the impact of rar...
      • A comparative analysis of algorithms for somatic S...
      • Polyadenylation site–induced decay of upstream tra...
      • Identifying driver mutations from sequencing data ...
      • BMC Genomics | Full text | Large-scale integrative...
      • Trends in Genetics - Human housekeeping genes, rev...
      • Genome Biology | Abstract | Transcriptome analysis...
    • ►  June (17)
    • ►  May (15)
    • ►  April (32)
Simple theme. Theme images by gaffera. Powered by Blogger.

About Me

YourDigitalKnowledgeFinder
View my complete profile